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Tool fails to execute of include id field #43

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michael-kotliar opened this issue Oct 16, 2020 · 0 comments
Open

Tool fails to execute of include id field #43

michael-kotliar opened this issue Oct 16, 2020 · 0 comments
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@michael-kotliar
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Describe the bug
If CommandLineTool has id field then all inputs and outputs get prepended by this id. This results in failure while contructing CWLDAG

To Reproduce
Run cwl-v1.1 conformance test from Oct 7, 2020
Test cases:
(225) stage-array
(240) stage_file_array_basename_and_entryname
(238) stage_file_array
(239) stage_file_array_basename
(226) stage-array-dirs

Expected behavior
Shouldn't fail

Desktop

  • macOS 10.15.3 (19D76)
  • Python 3.7.7 (default, May 2 2020, 22:04:27)
  • cwltool==3.0.20200710214758
  • schema-salad==7.0.20200811075006
  • cwl-airflow (81b3526c0f2981c32e3e6b2285a2fee6278108b4)
  • apache-airflow==1.10.12
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