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1. Mayrlab/scUTRquant Mayrlab/scUTRquant Public

   Bioinformatics pipeline for single-cell 3' UTR isoform quantification

   Python 15 3

2. conda-forge/staged-recipes conda-forge/staged-recipes Public

   A place to submit conda recipes before they become fully fledged conda-forge feedstocks

   Python 710 5k

3. iRNA-COSI/APAeval iRNA-COSI/APAeval Public

   Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples

   Python 13 14

4. Conda Forge `staged-recipes` utility... Conda Forge `staged-recipes` utility scripts

   1

   #!/usr/bin/env bash -l

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   #'   Usage: `bash -l new-cran-pkg.sh {r-package}`

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   #' Purpose: Generates a Conda Forge recipe using `conda_r_skeleton_helper` and

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   #'          pushes this to a personal fork of `staged-recipes`.

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   #'  Notes: Should be located in and run from a `staged-recipes` clone prefix.

5. txcutr txcutr Public

   R methods for generating truncated transcript annotations

   R 1

6. CellularChainParser CellularChainParser Public

   A set of scripts for parsing definitions of graded (co)algebras.

   Python